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BaseInfo

ncRNA ID novel_gma_miR8070
Species Glycine max
Class miRNA
Genome position Chr9:22501804-22501889 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615;SRR1451621
Length 23
Mature sequence(if miRNA) 1 - GAGGAUAAAAGAAAGUAGAAAUC - 23
Stem-loop(if miRNA) --      A    AA  -       ---C   -      -   UUC
  GAGGAU AAAG  AG UAGAAAU    AAC AAAGUG AGA   A
  |||||| ||||  || |||||||    ||| |||||| |||
  UUUUUA UUUC  UC AUUUUUA    UUG UUUCAC UCU   C
UU      A    AC  U       AAUU   A      A   UUA
Stem-loop sequence GAGGAUAAAAGAAAGUAGAAAUCAACAAAGUGAGAUUCACAUUUCUACACUUUAGUUUUAAAUUUUUAUCUCACUUUAAUUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764806.1
ncRNA:23   CUAAAGAUGAAAGAAAAUAGGAG   1
  ***|||||=|||||||*||||||
targets:863   CCCUUCUAUUUUCUUUCAUCCUC   885

2.5 PREDICTED: Glycine max uncharacterized LOC100787051 (LOC100787051), mRNA uncharacterized LOC100787051(LOC100787051) coding protein psRNATarget
XM_006592616.2
ncRNA:23   CUAAAGAUGAAAGAAAAUAGGAG   1
  |*|||=|*=||||||||||||||
targets:477   GCUUUUUUUUUUCUUUUAUCCUC   499

3.0 PREDICTED: Glycine max auxin response factor 4-like (LOC100812909), transcript variant X1, mRNA auxin response factor 4-like(LOC100812909) coding protein psRNATarget
XM_006592617.2
ncRNA:23   CUAAAGAUGAAAGAAAAUAGGAG   1
  |*|||=|*=||||||||||||||
targets:477   GCUUUUUUUUUUCUUUUAUCCUC   499

3.0 PREDICTED: Glycine max auxin response factor 4-like (LOC100812909), transcript variant X2, mRNA auxin response factor 4-like(LOC100812909) coding protein psRNATarget
XM_003540118.3
ncRNA:23   CUAAAGAUGAAAGAAAAUAGGAG   1
  |*|||=|*=||||||||||||||
targets:477   GCUUUUUUUUUUCUUUUAUCCUC   499

3.0 PREDICTED: Glycine max auxin response factor 4-like (LOC100812909), transcript variant X3, mRNA auxin response factor 4-like(LOC100812909) coding protein psRNATarget
XM_006592619.2
ncRNA:23   CUAAAGAUGAAAGAAAAUAGGAG   1
  |*|||=|*=||||||||||||||
targets:476   GCUUUUUUUUUUCUUUUAUCCUC   498

3.0 PREDICTED: Glycine max auxin response factor 4-like (LOC100812909), transcript variant X4, mRNA auxin response factor 4-like(LOC100812909) coding protein psRNATarget