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BaseInfo

ncRNA ID novel_gma_miR8055
Species Glycine max
Class miRNA
Genome position Chr8:40069824-40069879 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 23
Mature sequence(if miRNA) 1 - AUGCAAUCAAAGGACUUAAUCCU - 23
Stem-loop(if miRNA) --   A       --C      UA    CC
  GAU UAAGUCC   GAUUGC  GUGU  A
  ||| |||||||   ||||||  ||||  A
  CUA AUUCAGG   CUAACG  UACA  U
UC   -       AAA      --    AA
Stem-loop sequence GAUAUAAGUCCCGAUUGCUAGUGUCCAAUAAACAUGCAAUCAAAGGACUUAAUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577509.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||*||||||||||||||||||
targets:66   AGGACUAAGUCCUUUGAUUGCAU   88

1.0 PREDICTED: Glycine max uncharacterized LOC102670047 (LOC102670047), mRNA uncharacterized LOC102670047(LOC102670047) coding protein psRNATarget
XM_006590047.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||||||||||||||||||=||
targets:333   AGGAUUAAGUCCUUUGAUUGUAU   355

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102662340), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102662340) coding protein psRNATarget
XM_006599781.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||||||||||||||||*||||
targets:138   AGGAUUAAGUCCUUUGAUCGCAU   160

1.5 PREDICTED: Glycine max uncharacterized LOC102665343 (LOC102665343), mRNA uncharacterized LOC102665343(LOC102665343) coding protein psRNATarget
XM_006593186.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||||||||||||||||*||||
targets:270   AGGAUUAAGUCCUUUGAUCGCAU   292

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102667994), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102667994) coding protein psRNATarget
XM_006606652.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||||||||||||||||*||||
targets:318   AGGAUUAAGUCCUUUGAUCGCAU   340

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102661295), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102661295) coding protein psRNATarget
XM_006598027.2
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||||||||||||||||*||||
targets:552   AGGAUUAAGUCCUUUGAUCGCAU   574

1.5 PREDICTED: Glycine max uncharacterized LOC102663640 (LOC102663640), mRNA uncharacterized LOC102663640(LOC102663640) coding protein psRNATarget
XM_006595157.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*|||||||||||||||||||=|
targets:201   AAGAUUAAGUCCUUUGAUUGCGU   223

1.5 PREDICTED: Glycine max uncharacterized LOC102670260 (LOC102670260), mRNA uncharacterized LOC102670260(LOC102670260) coding protein psRNATarget
XM_006601486.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||*|||||||||||||||*||||
targets:207   AGAAUUAAGUCCUUUGAUCGCAU   229

1.5 PREDICTED: Glycine max uncharacterized LOC102665863 (LOC102665863), mRNA uncharacterized LOC102665863(LOC102665863) coding protein psRNATarget
XM_006606777.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||*|||||||||||||||*||||
targets:390   AGUAUUAAGUCCUUUGAUCGCAU   412

1.5 PREDICTED: Glycine max uncharacterized LOC102661429 (LOC102661429), mRNA uncharacterized LOC102661429(LOC102661429) coding protein psRNATarget
XM_006589923.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||||||||||||||||*||||
targets:405   AAGAUUAAGUCCUUUGAUCGCAU   427

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102661978), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102661978) coding protein psRNATarget
XM_006606595.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||||||||||||||||*||||
targets:399   AAGAUUAAGUCCUUUGAUCGCAU   421

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102668985), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102668985) coding protein psRNATarget
XM_006593205.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||*||||||||||||||||=|
targets:318   AGGACUAAGUCCUUUGAUUGCGU   340

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102661279), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102661279) coding protein psRNATarget
XM_006599834.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||*|||||||||||||*||||
targets:393   AGGACUAAGUCCUUUGAUCGCAU   415

2.5 PREDICTED: Glycine max uncharacterized LOC102668681 (LOC102668681), mRNA uncharacterized LOC102668681(LOC102668681) coding protein psRNATarget
XM_006593178.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||*|||||||||||||*||||
targets:396   AGGACUAAGUCCUUUGAUCGCAU   418

2.5 PREDICTED: Glycine max uncharacterized LOC102666048 (LOC102666048), mRNA uncharacterized LOC102666048(LOC102666048) coding protein psRNATarget
XM_006603179.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  ||||*||||||||*|||||||||
targets:498   AGGACUAAGUCCUCUGAUUGCAU   520

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102668083), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102668083) coding protein psRNATarget
XM_014764732.1
ncRNA:23   UC--CUAAUUCAGGAAACUAACGUA   1
  ||--||*|||||||||||||*||||
targets:193   AGCAGACUAAGUCCUUUGAUCGCAU   217

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106795312), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106795312) coding protein psRNATarget
XM_006589862.2
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||*|||||||||||||*||||
targets:396   AAGACUAAGUCCUUUGAUCGCAU   418

2.5 PREDICTED: Glycine max uncharacterized LOC102667684 (LOC102667684), mRNA uncharacterized LOC102667684(LOC102667684) coding protein psRNATarget
XM_006573065.2
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||||||*|||||||||*||||
targets:5187   AAGAUUAACUCCUUUGAUCGCAU   5209

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X2, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773439.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||||||*|||||||||*||||
targets:5293   AAGAUUAACUCCUUUGAUCGCAU   5315

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X3, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
XM_014773434.1
ncRNA:23   UCCUAAUUCAGGAAACUAACGUA   1
  |*||||||*|||||||||*||||
targets:5293   AAGAUUAACUCCUUUGAUCGCAU   5315

2.5 PREDICTED: Glycine max uncharacterized LOC102666756 (LOC102666756), transcript variant X1, mRNA uncharacterized LOC102666756(LOC102666756) coding protein psRNATarget
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