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BaseInfo

ncRNA ID novel_gma_miR8038
Species Glycine max
Class miRNA
Genome position Chr7:40824103-40824238 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - UACAUCUGUGGACCAUGAACCACC - 24
Stem-loop(if miRNA) --                  A                          C                 UAA
  UACAUCUGUGGACCAUGA CCACCAUAUAAGGAGACCUGACACCA ACUCUAACCCAAAACCU   G
  |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
  AUGUGGAUACCUGGUGCU GGUGGUGUAUUCCUCUGGACUGUGGU UGAGAUUGGGUUUUGGA   G
CU                  C                          A                 CUC
Stem-loop sequence UACAUCUGUGGACCAUGAACCACCAUAUAAGGAGACCUGACACCACACUCUAACCCAAAACCUUAAGGCUCAGGUUUUGGGUUAGAGUAUGGUGUCAGGUCUCCUUAUGUGGUGGCUCGUGGUCCAUAGGUGUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600923.2
ncRNA:24   CCACCAAGUACCAGGUGUCUACAU   1
  |*||*|*||||||||||*||||||
targets:734   GCUGAUGCAUGGUCCACCGAUGUA   757

2.5 PREDICTED: Glycine max uncharacterized LOC100816052 (LOC100816052), mRNA uncharacterized LOC100816052(LOC100816052) coding protein psRNATarget