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BaseInfo

ncRNA ID novel_gma_miR8025
Species Glycine max
Class miRNA
Genome position Chr6:17268700-17268855 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 133 - GUUAAGUGAUGACGUGGUAGACAG - 156
Stem-loop(if miRNA) --            C   G                   -    -  UU    UA     U        ACA  ACCACCU
  GUUAAGUGAUGA GUG UAGACAGAGUGUCAUAUCA CAUG CC  GUCA  GAUAU UUAUUGUC   UC       U
  |||||||||||| ||| ||||||||||||||||||| |||| ||  ||||  ||||| ||||||||   ||
  CAAUUCACUACU CAU GUUUGUUUCAUAGUGUAGU GUGU GG  UAGU  CUGUG AAUAAUAG   AG       C
AG            A   A                   A    A  --    CA     C        GAC  ACAGUAA
Stem-loop sequence GUUAAGUGAUGACGUGGUAGACAGAGUGUCAUAUCACAUGCCUUGUCAUAGAUAUUUUAUUGUCACAUCACCACCUUCAAUGACAGACAGGAUAAUAACGUGUCACUGAUGGAUGUGAUGAUGUGAUACUUUGUUUGAUACAUCAUCACUUAACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   GACAGAUGGUGCAGUAGUGAAUUG   1
  ||||=||=||||||||||||||||
targets:761   CUGUUUAUCACGUCAUCACUUAAC   784

1.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget