Search result

BaseInfo

ncRNA ID novel_gma_miR8022
Species Glycine max
Class miRNA
Genome position Chr6:9282049-9282178 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615;SRR1451616;SRR1294476
Length 24
Mature sequence(if miRNA) 107 - AAACAAACACAUUUUGCAAGGACU - 130
Stem-loop(if miRNA) --    C                            C          C     UA      UUUUU
  UCCU GCAAAAUGUGUUUGUUUUGUUUUUCGUC UUAAAGUGCU UAGAG  UGCUUU     A
  |||| |||||||||||||||||||||||||||| |||||||||| |||||  ||||||
  AGGA CGUUUUACACAAACAAAACAAAAAGCAG AAUUUCGCGA AUCUU  GCGAAA     C
UC    A                            A          A     UC      CUUGU
Stem-loop sequence UCCUCGCAAAAUGUGUUUGUUUUGUUUUUCGUCCUUAAAGUGCUCUAGAGUAUGCUUUUUUUUACUGUUCAAAGCGCUUUCUAAAGCGCUUUAAAGACGAAAAACAAAACAAACACAUUUUGCAAGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597742.2
ncRNA:24   UCAGGAACGUUUUACACAAACAAA   1
  **||*||*=|=|||||||||||||
targets:3581   UUUCAUUAUAGAAUGUGUUUGUUU   3604

3.0 PREDICTED: Glycine max uncharacterized LOC102660146 (LOC102660146), mRNA uncharacterized LOC102660146(LOC102660146) coding protein psRNATarget