Search result

BaseInfo

ncRNA ID novel_gma_miR8018
Species Glycine max
Class miRNA
Genome position Chr6:48082671-48082733 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 19
Mature sequence(if miRNA) 45 - UUAAUCCUUUGAAUUCUCU - 63
Stem-loop(if miRNA) --      C          C   GAAAAAGAGAAG G
  UUAAUC UUUGAAUUCU UUG            G A
  |||||| |||||||||| |||            |
  GAUUAG AGACUUAAGA AAC            C G
CU      C          A   -----------A A
Stem-loop sequence UUAAUCCUUUGAAUUCUCUUGGAAAAAGAGAAGGGAGACACAAAAGAAUUCAGACGAUUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552382.3
ncRNA:19   UCUCUUAAGUUUCCUAAUU   1
  ||||||||||||||*|||*
targets:761   AGAGAAUUCAAAGGCUUAU   779

2.5 PREDICTED: Glycine max protein LUTEIN DEFICIENT 5, chloroplastic (CYP97C10), mRNA protein LUTEIN DEFICIENT 5, chloroplastic(CYP97C10) coding protein psRNATarget