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BaseInfo

ncRNA ID novel_gma_miR8015
Species Glycine max
Class miRNA
Genome position Chr6:41354996-41355084 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - UAAGAACCGUCUUAGAAUGAC - 21
Stem-loop(if miRNA) --UAAG      C  A     A    C                 A
      AACCGU UU GAAUG CAUG UUUCUAAGACGGUUCUU U
      |||||| || ||||| |||| |||||||||||||||||
      UUGGCA AA CUUAC GUAC AAAGAUUCUGCUAAGAA A
AUAUUA      A  A     -    A                 U
Stem-loop sequence UAAGAACCGUCUUAGAAUGACAUGCUUUCUAAGACGGUUCUUAUAUAAGAAUCGUCUUAGAAAACAUGCAUUCAAAAACGGUUAUUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:21   CAGUAAGAUUCUGCCAAGAAU   1
  **||||||||||||||||||*
targets:2512   CACAUUCUAAGACGGUUCUUU   2532

1.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:21   CAGUAAGAUUCUGCCAAGAAU   1
  **|||||||||||||||||**
targets:2608   UACAUUCUAAGACGGUUCUCU   2628

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014775607.1
ncRNA:21   CAGUAAGAUUCUGCCAAGAAU   1
  **|||||*|||||||||*|||
targets:1487   AACAUUCAAAGACGGUUAUUA   1507

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:21   CAGUAAGAUUCUGCCAAGAAU   1
  **|||||*|||||||||*|||
targets:1542   AACAUUCAAAGACGGUUAUUA   1562

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget