ncRNA ID | novel_gma_miR8000 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:30685207-30685319 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUCUUACAUGUAUGUCACUCG - 21 |
Stem-loop(if miRNA) |
--            --U    U    A    -GAUAC     UGCA  C  GU     G   GGUGACAUACAU   GGAG CAUG UAUU      GCUCU    UG AU  CACUU C   ||||||||||||   |||| |||| ||||      |||||    || ||  ||||| C   UCACUGUAUGUA   UCUC GUAU AUGG      UGAGG    AC UA  GUGGG G GC            CAU    -    A    UAGUAC     --UC  A  UG     U |
Stem-loop sequence | GGUGACAUACAUUGGAGUCAUGAUAUUGAUACGCUCUUGCAUGCAUGUCACUUGCCGUGGGUGGUAUACACUGGAGUCAUGAUGGUAAUAUGCUCUUACAUGUAUGUCACUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762079.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102662874 (LOC102662874), mRNA | uncharacterized LOC102662874(LOC102662874) | coding protein | psRNATarget |