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BaseInfo

ncRNA ID novel_gma_miR8000
Species Glycine max
Class miRNA
Genome position Chr5:30685207-30685319 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - CUCUUACAUGUAUGUCACUCG - 21
Stem-loop(if miRNA) --            --U    U    A    -GAUAC     UGCA  C  GU     G
  GGUGACAUACAU   GGAG CAUG UAUU      GCUCU    UG AU  CACUU C
  ||||||||||||   |||| |||| ||||      |||||    || ||  ||||| C
  UCACUGUAUGUA   UCUC GUAU AUGG      UGAGG    AC UA  GUGGG G
GC            CAU    -    A    UAGUAC     --UC  A  UG     U
Stem-loop sequence GGUGACAUACAUUGGAGUCAUGAUAUUGAUACGCUCUUGCAUGCAUGUCACUUGCCGUGGGUGGUAUACACUGGAGUCAUGAUGGUAAUAUGCUCUUACAUGUAUGUCACUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762079.1
ncRNA:21   GCUCACUGUAUGUACA-UUCUC   1
  **||||||||||||||-|||||
targets:2042   ACAGUGACAUACAUGUCAAGAG   2063

3.0 PREDICTED: Glycine max uncharacterized LOC102662874 (LOC102662874), mRNA uncharacterized LOC102662874(LOC102662874) coding protein psRNATarget