ncRNA ID | novel_gma_miR7997 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:39027311-39027487 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 22 |
Mature sequence(if miRNA) | 156 - AAGACUCAAACUCGUCGUUGUC - 177 |
Stem-loop(if miRNA) |
--    A     C  C        U           G                        CU             -ACA    A ACA   CAAC ACGAG UU AGUCUUGG UAGUUUGAGAC UUGAGGAAAGAAAAUGUUUGGGUA  ACUUAGGACUAUA    UAUG C   U   |||| ||||| || |||||||| ||||||||||| ||||||||||||||||||||||||  |||||||||||||    |||| |   A   GUUG UGCUC AA UCAGAAUC AUUAAACUCUG AAUUCUUUUCUUUUACAGACUCAU  UGAAUUCUGAUGU    AUAC G   G CU    C     A  C        U           A                        AC             AUCA    - AUA |
Stem-loop sequence | CAACAACGAGCUUCAGUCUUGGUUAGUUUGAGACGUUGAGGAAAGAAAAUGUUUGGGUACUACUUAGGACUAUAACAUAUGACACAUAGAUAGCAUAACUAUGUAGUCUUAAGUCAUACUCAGACAUUUUCUUUUCUUAAAGUCUCAAAUUAUCUAAGACUCAAACUCGUCGUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003538868.3 |
|
3.0 | PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 5-like (LOC100782414), mRNA | protein FAR1-RELATED SEQUENCE 5-like(LOC100782414) | coding protein | psRNATarget |