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BaseInfo

ncRNA ID novel_gma_miR7997
Species Glycine max
Class miRNA
Genome position Chr5:39027311-39027487 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 22
Mature sequence(if miRNA) 156 - AAGACUCAAACUCGUCGUUGUC - 177
Stem-loop(if miRNA) --    A     C  C        U           G                        CU             -ACA    A ACA
  CAAC ACGAG UU AGUCUUGG UAGUUUGAGAC UUGAGGAAAGAAAAUGUUUGGGUA  ACUUAGGACUAUA    UAUG C   U
  |||| ||||| || |||||||| ||||||||||| ||||||||||||||||||||||||  |||||||||||||    |||| |   A
  GUUG UGCUC AA UCAGAAUC AUUAAACUCUG AAUUCUUUUCUUUUACAGACUCAU  UGAAUUCUGAUGU    AUAC G   G
CU    C     A  C        U           A                        AC             AUCA    - AUA
Stem-loop sequence CAACAACGAGCUUCAGUCUUGGUUAGUUUGAGACGUUGAGGAAAGAAAAUGUUUGGGUACUACUUAGGACUAUAACAUAUGACACAUAGAUAGCAUAACUAUGUAGUCUUAAGUCAUACUCAGACAUUUUCUUUUCUUAAAGUCUCAAAUUAUCUAAGACUCAAACUCGUCGUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538868.3
ncRNA:22   CU---GUUGCUGCUCAAACUCAGAA   1
  ||---||*=||*|||||||||||||
targets:2037   GAGUCCAUUGAGGAGUUUGAGUCUU   2061

3.0 PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 5-like (LOC100782414), mRNA protein FAR1-RELATED SEQUENCE 5-like(LOC100782414) coding protein psRNATarget