ncRNA ID | novel_gma_miR7994 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:31487944-31488062 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGACAUCGGUUUUCUAGUAAAAU - 24 |
Stem-loop(if miRNA) |
--                   A    CG          U       C           A   UUGACAUCGGUUUUCUAGU AAAU  AUGUUAAUGU AUAUAUU ACAUCGGUUUU U   ||||||||||||||||||| ||||  |||||||||| ||||||| ||||||||||| A   AACUGUAGUCAAAAGAUCA UUUG  UACAAUUACA UAUAUAA UGUAGCCAAAA G GC                   C    AA          U       U           C |
Stem-loop sequence | UUGACAUCGGUUUUCUAGUAAAAUCGAUGUUAAUGUUAUAUAUUCACAUCGGUUUUAUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUAAGUUUCACUAGAAAACUGAUGUCAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765729.1 |
|
3.0 | PREDICTED: Glycine max rho GTPase-activating protein 5-like (LOC100812401), mRNA | rho GTPase-activating protein 5-like(LOC100812401) | coding protein | psRNATarget |