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BaseInfo

ncRNA ID novel_gma_miR7986
Species Glycine max
Class miRNA
Genome position Chr4:9142781-9142908 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - UAUCGCCCAAGACAUUUAUAGAAC - 24
Stem-loop(if miRNA) UAUCGCCCAAGACAUUUAU          GAAAGU      A   --U     U   U   C      UGUA
                   AGAACAUGUU      AUGAGC UUA   UGUUA UGA GAU AAUAAG    A
                   ||||||||||      |||||| |||   ||||| ||| ||| ||||||
                   UUUUGUAUAG      UACUCG AGU   ACAAU AUU UUA UUAUUC    U
------------CAUUAGU          --UAUU      -   UUC     C   -   C      UAUU
Stem-loop sequence UAUCGCCCAAGACAUUUAUAGAACAUGUUGAAAGUAUGAGCAUUAUUGUUAUUGAUGAUCAAUAAGUGUAAUUUAUCUUAUUCAUUUUACUAACACUUUGAGCUCAUUUAUGAUAUGUUUUUGAUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535158.3
ncRNA:24   CAAGAUAUUUACAGAACCCGCUAU   1
  ****||||*|||||*|||||||||
targets:2028   AGAAUAUAUAUGUCAUGGGCGAUA   2051

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 5.2-like (LOC100813385), mRNA protein NRT1/ PTR FAMILY 5.2-like(LOC100813385) coding protein psRNATarget