ncRNA ID | novel_gma_miR7986 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:9142781-9142908 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUCGCCCAAGACAUUUAUAGAAC - 24 |
Stem-loop(if miRNA) |
UAUCGCCCAAGACAUUUAU          GAAAGU      A   --U     U   U   C      UGUA                    AGAACAUGUU      AUGAGC UUA   UGUUA UGA GAU AAUAAG    A                    ||||||||||      |||||| |||   ||||| ||| ||| ||||||                    UUUUGUAUAG      UACUCG AGU   ACAAU AUU UUA UUAUUC    U ------------CAUUAGU          --UAUU      -   UUC     C   -   C      UAUU |
Stem-loop sequence | UAUCGCCCAAGACAUUUAUAGAACAUGUUGAAAGUAUGAGCAUUAUUGUUAUUGAUGAUCAAUAAGUGUAAUUUAUCUUAUUCAUUUUACUAACACUUUGAGCUCAUUUAUGAUAUGUUUUUGAUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003535158.3 |
|
2.5 | PREDICTED: Glycine max protein NRT1/ PTR FAMILY 5.2-like (LOC100813385), mRNA | protein NRT1/ PTR FAMILY 5.2-like(LOC100813385) | coding protein | psRNATarget |