Search result

BaseInfo

ncRNA ID novel_gma_miR7984
Species Glycine max
Class miRNA
Genome position Chr4:19729000-19729106 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 20
Mature sequence(if miRNA) 88 - CAUCGGUUCUCUAGAAGAAC - 107
Stem-loop(if miRNA) --        C  UAGA                                   U
  CAUCGGUU UC    AGAACCGAUGUUAAUGUAAUAUAUUAACAUCGGUU U
  |||||||| ||    ||||||||||||||||||||||||||||||||||| C
  GUAGCCAA AG    UUUUGGCUACAAUUACAUUAUAUAAUUGUAGCCAA U
CU        A  CUGA                                   A
Stem-loop sequence CAUCGGUUCUCUAGAAGAACCGAUGUUAAUGUAAUAUAUUAACAUCGGUUUUCUAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUUAGUCGAAAACCGAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003546393.3
ncRNA:20   CAAGAAGAUCUCUUGGCUAC   1
  *||=|*|||||||||||||*
targets:1174   CUUUUGCUAGAGAACCGAUA   1193

3.0 PREDICTED: Glycine max 4-coumarate--CoA ligase 1-like (LOC100819192), mRNA 4-coumarate--CoA ligase 1-like(LOC100819192) coding protein psRNATarget