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BaseInfo

ncRNA ID novel_gma_miR7979
Species Glycine max
Class miRNA
Genome position Chr4:41209610-41209716 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - UUCCGGAAGAAGAAUUUGUGAAUU - 24
Stem-loop(if miRNA) --    AU                  A  --A      U              A
  UUCA  AAUUCUUCUUCCGGAAGA GU   UUUCCG AAACUUUUCGGAAA A
  ||||  |||||||||||||||||| ||   |||||| |||||||||||||| G
  AAGU  UUAAGAAGAAGGCCUUCU CA   AAAGGC UUUGAAAGGCUUUU C
UU    GU                  A  AAA      C              U
Stem-loop sequence UUCAAUAAUUCUUCUUCCGGAAGAAGUAUUUCCGUAAACUUUUCGGAAAAAGCUUUUUCGGAAAGUUUCCGGAAAAAAACAUCUUCCGGAAGAAGAAUUUGUGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:24   UUAAGUGUUUAAGAAGAAGGCCUU   1
  **||||=*||||||||||||||||
targets:1650   CCUUCAUCAAUUCUUCUUCCGGAA   1673

2.0 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget