ncRNA ID | novel_gma_miR7976 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:26767118-26767256 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 21 |
Mature sequence(if miRNA) | 119 - UUUCUAUGUGGAAGUAGGUCU - 139 |
Stem-loop(if miRNA) |
--     UUG  U  --     --CA    UC    A   ----   -  U   GCCU    UGACC     ACC   ACCUG   CC CA  GAAAA    AGCC  CAGA GCU    GCA CA GUU    CAGC     CUGAA   A   |||||   || ||  |||||    ||||  |||| |||    ||| || |||    ||||     |||||   UGGAU   GG GU  CUUUU    UUGG  GUUU CGG    CGU GU CAA    GUCG     GACUU   A UC     GAA  U  AU     UAUC    -U    A   AAUU   U  -   AGUU    UCAAA     CCG |
Stem-loop sequence | ACCUGUUGCCUCAGAAAACAAGCCUCCAGAAGCUGCACAUGUUGCCUCAGCUGACCCUGAAACCAAGCCUUCAGAAACUGCUGUUGAAACUGUUGCUUAAGGCAUUUGUGGUUCUAUUUUUCUAUGUGGAAGUAGGUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003541625.3 |
|
2.5 | PREDICTED: Glycine max probable beta-1,3-galactosyltransferase 20 (LOC100790430), mRNA | probable beta-1,3-galactosyltransferase 20(LOC100790430) | coding protein | psRNATarget |