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BaseInfo

ncRNA ID novel_gma_miR7972
Species Glycine max
Class miRNA
Genome position Chr3:2046616-2046709 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 71 - AGGUAAAUAACGUCUUAGAAUGCU - 94
Stem-loop(if miRNA) --      A AA              C      A    UG  ACUUA
  AGGUAA U  CGUCUUAGAAUGCU ACUUUC AAGA  GU     C
  |||||| |  |||||||||||||| |||||| ||||  ||
  UUCAUU A  GCAGAAUCUUACGA UGAAAG UUCU  UA     A
AC      C GG              A      A    GU  CUACU
Stem-loop sequence AGGUAAAUAACGUCUUAGAAUGCUCACUUUCAAAGAUGGUACUUACAUCAUCAUUGUCUUAGAAAGUAAGCAUUCUAAGACGGGACUUACUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540232.3
ncRNA:24   UCGUAAGAUUCUGCAAUAAAUGGA   1
  *||-||||||*||||||*||||||
targets:1367   UGC-UUCUAACACGUUAAUUACCU   1389

2.5 PREDICTED: Glycine max protein FAF-like, chloroplastic (LOC100783331), mRNA protein FAF-like, chloroplastic(LOC100783331) coding protein psRNATarget