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BaseInfo

ncRNA ID novel_gma_miR7950
Species Glycine max
Class miRNA
Genome position Chr11:26666449-26666514 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - AGUAGAGAAACUCUUAAAAGUACU - 24
Stem-loop(if miRNA) --UG          C              A GC
    UUUUUAAGAG UUCUCUACUGGAAA A  U
    |||||||||| |||||||||||||| |
    GAAAAUUCUC AAGAGAUGAUCUUU U  C
UCAU          A              A AU
Stem-loop sequence UGUUUUUAAGAGCUUCUCUACUGGAAAAAGCUCUAUAUUUCUAGUAGAGAAACUCUUAAAAGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540641.2
ncRNA:24   UCAUGAAAAUUCUCAAAGAGAUGA   1
  ||*||||*||||||*|||||||||
targets:2433   AGAACUUCUAAGAGCUUCUCUACU   2456

2.5 PREDICTED: Glycine max uncharacterized LOC100793232 (LOC100793232), transcript variant X1, mRNA uncharacterized LOC100793232(LOC100793232) coding protein psRNATarget
XM_006592067.1
ncRNA:24   UCAUGAAAAUUCUCAAAGAGAUGA   1
  ||*||||*||||||*|||||||||
targets:2433   AGAACUUCUAAGAGCUUCUCUACU   2456

2.5 PREDICTED: Glycine max uncharacterized LOC100793232 (LOC100793232), transcript variant X2, mRNA uncharacterized LOC100793232(LOC100793232) coding protein psRNATarget