ncRNA ID | novel_gma_miR7949 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:23234449-23234666 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUGUUUCAAUCUAUUACCUG - 20 |
Stem-loop(if miRNA) |
-          C  U       C       C C  A        C    CG      AUGGAGU                 A           A          ---A    U  UUGUUUCAAU UA UACCUGU GUUAGUC C UU UGUUAAGU AUGA  UGACAA       GUUAUAUUAUCACGCCU AUCACUGACGC UCAUUGUCAC    UCAU G  |||||||||| || ||||||| ||||||| | || |||||||| ||||  ||||||       ||||||||||||||||| ||||||||||| ||||||||||    |||| A  AACAAGGUUA AU AUGGACA CAAUCAG G AA GCAAUUUA UACU  AUUGUU       UAGUGUAGUAGUGCGGA UAGUGAUUGUG AGUAACAGUG    AGUG A A          A  C       A       A U  G        C    AU      -------                 A           G          CGGA    G |
Stem-loop sequence | UUGUUUCAAUCUAUUACCUGUCGUUAGUCCCCUUAUGUUAAGUCAUGACGUGACAAAUGGAGUGUUAUAUUAUCACGCCUAAUCACUGACGCAUCAUUGUCACAUCAUUGAAGGUGAAGGCGUGACAAUGAGGUGUUAGUGAUAAGGCGUGAUGAUGUGAUUUGUUAUAUCAUCAUUUAACGGAAUGAGACUAACAACAGGUACUAAAUUGGAACAAA |