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BaseInfo

ncRNA ID	novel_gma_miR7944
Species	Glycine max
Class	miRNA
Genome position	Chr2:3117576-3117707 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	21
Mature sequence(if miRNA)	112 - UAAUUCUGAUUGGAGAACAGA - 132
Stem-loop(if miRNA)	--                    -   --       UAU       G G   G        G  AUUG   UAAUUCUGAUUGGAGAACAG AAC  CAAGAGC   UAAGGAA U CAU UAAGUUUU UU    G   |||||||||||||||||||| |||  |||||||   ||||||| | ||| |||||||| ||    A   GUUAAGAUUAAUCUCUUGUU UUG  GUUUUUG   AUUUCUU A GUA GUUCAAAA AG    G AG                    G   UA       UGU       G G   G        G  GUUU
Stem-loop sequence	UAAUUCUGAUUGGAGAACAGAACCAAGAGCUAUUAAGGAAGUGCAUGUAAGUUUUGUUAUUGGAGUUUGGAGAAAACUUGGAUGGAGUUCUUUAUGUGUUUUUGAUGUUGUUGUUCUCUAAUUAGAAUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003519237.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=||||=|||||||||||||| targets:1694   GUUGUUUUCCAAUCAGAAUUA   1714 Target Full Sequence	1.0	PREDICTED: Glycine max tyrosine--tRNA ligase, chloroplastic/mitochondrial-like (LOC100813016), mRNA	tyrosine--tRNA ligase, chloroplastic/mitochondrial-like(LOC100813016)	coding protein	psRNATarget
XM_003542769.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   **||||=|||||||||||||| targets:1354   GAUGUUUUCCAAUCAGAAUUA   1374 Target Full Sequence	1.0	PREDICTED: Glycine max U-box domain-containing protein 11-like (LOC100819160), mRNA	U-box domain-containing protein 11-like(LOC100819160)	coding protein	psRNATarget
XM_006588203.2	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=||||=|||||||||||||= targets:247   GUUGUUUUCCAAUCAGAAUUG   267 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized sugar kinase slr0537-like (LOC100792076), mRNA	uncharacterized sugar kinase slr0537-like(LOC100792076)	coding protein	psRNATarget
NM_001250289.2	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *|||||=||=||||||||||| targets:604   GCUGUUUUCUAAUCAGAAUUA   624 Target Full Sequence	2.5	Glycine max uncharacterized LOC100306080 (LOC100306080), mRNA	uncharacterized LOC100306080(LOC100306080)	coding protein	psRNATarget
BT090006.1	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *|||||=||=||||||||||| targets:606   GCUGUUUUCUAAUCAGAAUUA   626 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-3K6 unknown mRNA	NA	coding protein	psRNATarget
XM_003545760.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *|||||=||=||||||||||| targets:794   GCUGUUUUCUAAUCAGAAUUA   814 Target Full Sequence	2.5	PREDICTED: Glycine max B-box zinc finger protein 32-like (LOC100805832), mRNA	B-box zinc finger protein 32-like(LOC100805832)	coding protein	psRNATarget
XM_003540810.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=||||=|=|||||||||||| targets:3187   GUUGUUUUUCAAUCAGAAUUA   3207 Target Full Sequence	2.5	PREDICTED: Glycine max formin-like protein 3 (LOC100816477), mRNA	formin-like protein 3(LOC100816477)	coding protein	psRNATarget
XM_003546663.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   **||||=|||=|||||||||| targets:1284   CAUGUUUUCCGAUCAGAAUUA   1304 Target Full Sequence	2.5	PREDICTED: Glycine max U-box domain-containing protein 11-like (LOC100787115), mRNA	U-box domain-containing protein 11-like(LOC100787115)	coding protein	psRNATarget
XM_003531141.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *|||||=|||||*|||||||| targets:793   GCUGUUUUCCAACCAGAAUUA   813 Target Full Sequence	2.5	PREDICTED: Glycine max probable signal peptidase complex subunit 1 (LOC100526911), mRNA	probable signal peptidase complex subunit 1(LOC100526911)	coding protein	psRNATarget
XM_003544488.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=||||||||*|||||||||= targets:1619   GUUGUUCUCCUAUCAGAAUUG   1639 Target Full Sequence	2.5	PREDICTED: Glycine max delta(8)-fatty-acid desaturase 2-like (LOC100775880), mRNA	delta(8)-fatty-acid desaturase 2-like(LOC100775880)	coding protein	psRNATarget
XM_006585935.2	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=|||||||||||||*||||= targets:428   AUUGUUCUCCAAUCAAAAUUG   448 Target Full Sequence	2.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_006585934.2	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *=|||||||||||||*||||= targets:428   AUUGUUCUCCAAUCAAAAUUG   448 Target Full Sequence	2.5	PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA	mucin-21-like(LOC100790656)	coding protein	psRNATarget
XM_003550220.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   **||||||||*|||||||||= targets:1735   GGUGUUCUCCUAUCAGAAUUG   1755 Target Full Sequence	2.5	PREDICTED: Glycine max delta(8)-fatty-acid desaturase 2-like (LOC100776476), mRNA	delta(8)-fatty-acid desaturase 2-like(LOC100776476)	coding protein	psRNATarget
XM_003548953.3	ncRNA:21   AGACAAGAGGUUAGUCUUAAU   1   *****|||||||||||||||| targets:2118   AAGAAUCUCCAAUCAGAAUUA   2138 Target Full Sequence	3.0	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g49142 (LOC100787841), mRNA	putative pentatricopeptide repeat-containing protein At3g49142(LOC100787841)	coding protein	psRNATarget