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BaseInfo

ncRNA ID novel_gma_miR7928
Species Glycine max
Class miRNA
Genome position Chr11:28489621-28489671 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 28 - GAGAAUCGUCUUAAAAUGUGCAGC - 51
Stem-loop(if miRNA) --        C          A  U
  UGCACAUU UAAGAUGGUU UU U
  |||||||| |||||||||| || C
  ACGUGUAA AUUCUGCUAA AG U
CG        A          G  U
Stem-loop sequence UGCACAUUCUAAGAUGGUUAUUUUCUUGAGAAUCGUCUUAAAAUGUGCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CGACGUGUAAAAUUCUGCUAAGAG   1
  ****=|||||*|||||||=|||||
targets:2604   AAAAUACAUUCUAAGACGGUUCUC   2627

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget