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BaseInfo

ncRNA ID novel_gma_miR7912
Species Glycine max
Class miRNA
Genome position Chr20:3911230-3911287 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 38 - CCAUUUCUUGAAGGGCCUGAA - 58
Stem-loop(if miRNA) --  A       U  UC     U -GA  U
  CA GUCUUUU GG  AAUGG G   AG U
  || ||||||| ||  ||||| |   || U
  GU CGGGAAG UC  UUACC C   UC G
AA  C       U  -U     - AGA  G
Stem-loop sequence CAAGUCUUUUUGGUCAAUGGUGGAAGUUUGGCUAGACCCAUUUCUUGAAGGGCCUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763572.1
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||||||||||||||*||||
targets:318   UUCAGGCCCUUCAAGACAUGG   338

1.5 PREDICTED: Glycine max uncharacterized LOC106795040 (LOC106795040), mRNA uncharacterized LOC106795040(LOC106795040) coding protein psRNATarget
XM_014775525.1
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||||||||||||||*||||
targets:325   UUCAGGCCCUUCAAGACAUGG   345

1.5 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget
NM_001255965.2
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||*|**|||||||||||||
targets:746   UUCAAGAACUUCAAGAAAUGG   766

3.0 Glycine max ATP-citrate synthase alpha chain protein 1-like (LOC100812287), mRNA ATP-citrate synthase alpha chain protein 1-like(LOC100812287) coding protein psRNATarget
BT097472.1
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||*|**|||||||||||||
targets:748   UUCAAGAACUUCAAGAAAUGG   768

3.0 Soybean clone JCVI-FLGm-26O23 unknown mRNA NA coding protein psRNATarget
XM_003531417.3
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||*|**|||||||||||||
targets:879   UUCAAGAACUUCAAGAAAUGG   899

3.0 PREDICTED: Glycine max ATP-citrate synthase alpha chain protein 1-like (LOC100787121), transcript variant X1, mRNA ATP-citrate synthase alpha chain protein 1-like(LOC100787121) coding protein psRNATarget
XM_006585319.2
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||*|**|||||||||||||
targets:939   UUCAAGAACUUCAAGAAAUGG   959

3.0 PREDICTED: Glycine max ATP-citrate synthase alpha chain protein 1-like (LOC100787121), transcript variant X2, mRNA ATP-citrate synthase alpha chain protein 1-like(LOC100787121) coding protein psRNATarget
XM_003546800.3
ncRNA:21   AAGUCCGGGAAGUUCUUUACC   1
  ||||*|**|||||||||||||
targets:879   UUCAAGAACUUCAAGAAAUGG   899

3.0 PREDICTED: Glycine max ATP-citrate synthase alpha chain protein 1-like (LOC100817228), mRNA ATP-citrate synthase alpha chain protein 1-like(LOC100817228) coding protein psRNATarget