ncRNA ID | novel_gma_miR7911 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:47395634-47395809 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 23 |
Mature sequence(if miRNA) | 154 - UAUAAAAUAAAUAAUGUUGCUGU - 176 |
Stem-loop(if miRNA) |
--                   C          C         UC               CUA  C   -----------      AUAUCAAAU   UAUAAAAUAAAUAAUGUUG UGUAUAUAAC GUAAAAUUU  AAUGUAUAUUUAAUG   AU GUA           UAAGUU         U   ||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||   || |||           ||||||   AUAUUUUAUUUAUUACAAU AUAUAUAUUG UAUUUUAAA  UUACAUAUAAAUUAC   UA CAU           AUUCAA         A CA                   A          U         GA               ACG  -   UUAAAUUUAUU      AACACUUUA |
Stem-loop sequence | UAUAAAAUAAAUAAUGUUGCUGUAUAUAACCGUAAAAUUUUCAAUGUAUAUUUAAUGCUAAUCGUAUAAGUUAUAUCAAAUUAAUUUCACAAAACUUAUUAUUUAAAUUUACAUGCACAUUAAAUAUACAUUAGAAAUUUUAUUGUUAUAUAUAAUAACAUUAUUUAUUUUAUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583497.2 |
|
1.0 | PREDICTED: Glycine max profilin-4-like (LOC100789770), mRNA | profilin-4-like(LOC100789770) | coding protein | psRNATarget |