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BaseInfo

ncRNA ID novel_gma_miR7911
Species Glycine max
Class miRNA
Genome position Chr20:47395634-47395809 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 23
Mature sequence(if miRNA) 154 - UAUAAAAUAAAUAAUGUUGCUGU - 176
Stem-loop(if miRNA) --                   C          C         UC               CUA  C   -----------      AUAUCAAAU
  UAUAAAAUAAAUAAUGUUG UGUAUAUAAC GUAAAAUUU  AAUGUAUAUUUAAUG   AU GUA           UAAGUU         U
  ||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||   || |||           ||||||
  AUAUUUUAUUUAUUACAAU AUAUAUAUUG UAUUUUAAA  UUACAUAUAAAUUAC   UA CAU           AUUCAA         A
CA                   A          U         GA               ACG  -   UUAAAUUUAUU      AACACUUUA
Stem-loop sequence UAUAAAAUAAAUAAUGUUGCUGUAUAUAACCGUAAAAUUUUCAAUGUAUAUUUAAUGCUAAUCGUAUAAGUUAUAUCAAAUUAAUUUCACAAAACUUAUUAUUUAAAUUUACAUGCACAUUAAAUAUACAUUAGAAAUUUUAUUGUUAUAUAUAAUAACAUUAUUUAUUUUAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583497.2
ncRNA:23   UGUCGUUGUAAUAAAUAAAAUAU   1
  |=|||||=|||||||||||||||
targets:73   AUAGCAAUAUUAUUUAUUUUAUA   95

1.0 PREDICTED: Glycine max profilin-4-like (LOC100789770), mRNA profilin-4-like(LOC100789770) coding protein psRNATarget