ncRNA ID | novel_gma_miR7905 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:48696752-48696975 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294475 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAACACGGAUCCACAAAUGUCUG - 23 |
Stem-loop(if miRNA) |
--          A                  G    C                AUAU                      G    G    U         A     AGA  AA   GACAUUUGUG AUUCGUGUUUAUGAGAAA AUGA UAUGAUCGCUUUGUAG    UGUAUAUUAUCAUGUCAUUUUU UACA GUAU CAUUCAUUU AAAUA   AU  U   |||||||||| |||||||||||||||||| |||| ||||||||||||||||    |||||||||||||||||||||| |||| |||| ||||||||| |||||   ||   CUGUAAACAC UAGGCACAAAUACUCUUU UACU AUACUAGCGAAACAUC    ACAUAUAAUAGUACAGUAAAAA AUGU CAUA GUAAGUAAA UUUAU   UA  A GU          C                  A    U                CACU                      A    A    U         A     AUG  AA |
Stem-loop sequence | GACAUUUGUGAAUUCGUGUUUAUGAGAAAGAUGACUAUGAUCGCUUUGUAGAUAUUGUAUAUUAUCAUGUCAUUUUUGUACAGGUAUUCAUUCAUUUAAAAUAAGAAUAAUAAAAUGUAUAUUUAAAAUGAAUGUAUACAUGUAAAAAAAUGACAUGAUAAUAUACAUCACCUACAAAGCGAUCAUAUUCAUAUUUCUCAUAAACACGGAUCCACAAAUGUCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003542121.3 |
|
3.0 | PREDICTED: Glycine max membrane-associated progesterone-binding protein 4-like (LOC100789028), mRNA | membrane-associated progesterone-binding protein 4-like(LOC100789028) | coding protein | psRNATarget | |||||||||
XM_003555629.3 |
|
3.0 | PREDICTED: Glycine max membrane-associated progesterone-binding protein 4-like (LOC100786670), mRNA | membrane-associated progesterone-binding protein 4-like(LOC100786670) | coding protein | psRNATarget |