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BaseInfo

ncRNA ID novel_gma_miR7905
Species Glycine max
Class miRNA
Genome position Chr14:48696752-48696975 [-]
Reference genome Glycine_max_v2.0
Source SRR1294475
Length 23
Mature sequence(if miRNA) 1 - AAACACGGAUCCACAAAUGUCUG - 23
Stem-loop(if miRNA) --          A                  G    C                AUAU                      G    G    U         A     AGA  AA
  GACAUUUGUG AUUCGUGUUUAUGAGAAA AUGA UAUGAUCGCUUUGUAG    UGUAUAUUAUCAUGUCAUUUUU UACA GUAU CAUUCAUUU AAAUA   AU  U
  |||||||||| |||||||||||||||||| |||| ||||||||||||||||    |||||||||||||||||||||| |||| |||| ||||||||| |||||   ||
  CUGUAAACAC UAGGCACAAAUACUCUUU UACU AUACUAGCGAAACAUC    ACAUAUAAUAGUACAGUAAAAA AUGU CAUA GUAAGUAAA UUUAU   UA  A
GU          C                  A    U                CACU                      A    A    U         A     AUG  AA
Stem-loop sequence GACAUUUGUGAAUUCGUGUUUAUGAGAAAGAUGACUAUGAUCGCUUUGUAGAUAUUGUAUAUUAUCAUGUCAUUUUUGUACAGGUAUUCAUUCAUUUAAAAUAAGAAUAAUAAAAUGUAUAUUUAAAAUGAAUGUAUACAUGUAAAAAAAUGACAUGAUAAUAUACAUCACCUACAAAGCGAUCAUAUUCAUAUUUCUCAUAAACACGGAUCCACAAAUGUCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003542121.3
ncRNA:23   GUCUGUAAACACCUAGGCACAAA   1
  =||=*|||**|||||||||||||
targets:290   UAGGAAUUCUUGGAUCCGUGUUU   312

3.0 PREDICTED: Glycine max membrane-associated progesterone-binding protein 4-like (LOC100789028), mRNA membrane-associated progesterone-binding protein 4-like(LOC100789028) coding protein psRNATarget
XM_003555629.3
ncRNA:23   GUCUGUAAACACCUAGGCACAAA   1
  =||=*|||**|||||||||||||
targets:275   UAGGAAUUCUUGGAUCCGUGUUU   297

3.0 PREDICTED: Glycine max membrane-associated progesterone-binding protein 4-like (LOC100786670), mRNA membrane-associated progesterone-binding protein 4-like(LOC100786670) coding protein psRNATarget