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BaseInfo

ncRNA ID novel_gma_miR7889
Species Glycine max
Class miRNA
Genome position Chr19:33571974-33572054 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 23
Mature sequence(if miRNA) 59 - CGGAAAGUUUCUGGAAGAAGUGU - 81
Stem-loop(if miRNA) --   AAAG                           UAAC
  CGG    UUUCUGGAAGAAGUGUUCUUCCGGAAG    C
  |||    |||||||||||||||||||||||||||    A
  GCC    GAAGGCCUUCUUCACAAGAAGGCCUUC    A
AG   CUCA                           UGCA
Stem-loop sequence CGGAAAGUUUCUGGAAGAAGUGUUCUUCCGGAAGUAACCAAACGUCUUCCGGAAGAACACUUCUUCCGGAAGACUCCCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:23   UGUGAAGAAGGUCUUUGAAAGGC   1
  |*|=||=||||=|||||||||||
targets:1676   AGAUUUUUUCCGGAAACUUUCCG   1698

2.5 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget