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BaseInfo

ncRNA ID	novel_gma_miR7888
Species	Glycine max
Class	miRNA
Genome position	Chr19:39587925-39587975 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	22
Mature sequence(if miRNA)	30 - UACGGAUCAAUUUCAUAUGGAU - 51
Stem-loop(if miRNA)	--            U          A   UACGGAUCAAUU CAUAUGGAUC G   |||||||||||| ||||||||||   GUGCUUAGUUGA GUGUGCUUAG U GG            -          U
Stem-loop sequence	UACGGAUCAAUUUCAUAUGGAUCAGUUGAUUCGUGUGAGUUGAUUCGUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||*||*||*||||||||||||| targets:87   AUGCAGAUCAAAUUGAUCCGUA   108 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||*||*||*||||||||||||| targets:682   AUGCAGAUCAAAUUGAUCCGUA   703 Target Full Sequence	2.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006594253.2	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||||||*|*||||||||||||= targets:2310   AUCCAUUUCAAAUUGAUCCGUG   2331 Target Full Sequence	3.0	PREDICTED: Glycine max protein SMG7L-like (LOC100789202), transcript variant X5, mRNA	protein SMG7L-like(LOC100789202)	coding protein	psRNATarget
XM_006594251.2	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||||||*|*||||||||||||= targets:2426   AUCCAUUUCAAAUUGAUCCGUG   2447 Target Full Sequence	3.0	PREDICTED: Glycine max protein SMG7L-like (LOC100789202), transcript variant X3, mRNA	protein SMG7L-like(LOC100789202)	coding protein	psRNATarget
XM_006594252.2	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||||||*|*||||||||||||= targets:2427   AUCCAUUUCAAAUUGAUCCGUG   2448 Target Full Sequence	3.0	PREDICTED: Glycine max protein SMG7L-like (LOC100789202), transcript variant X4, mRNA	protein SMG7L-like(LOC100789202)	coding protein	psRNATarget
XM_006594250.2	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||||||*|*||||||||||||= targets:2431   AUCCAUUUCAAAUUGAUCCGUG   2452 Target Full Sequence	3.0	PREDICTED: Glycine max protein SMG7L-like (LOC100789202), transcript variant X1, mRNA	protein SMG7L-like(LOC100789202)	coding protein	psRNATarget
XM_014765634.1	ncRNA:22   UAGGUAUACUUUAACUAGGCAU   1   ||||||*|*||||||||||||= targets:2514   AUCCAUUUCAAAUUGAUCCGUG   2535 Target Full Sequence	3.0	PREDICTED: Glycine max protein SMG7L-like (LOC100789202), transcript variant X2, mRNA	protein SMG7L-like(LOC100789202)	coding protein	psRNATarget