ncRNA ID | novel_gma_miR7880 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:13222736-13222831 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 22 |
Mature sequence(if miRNA) | 75 - UGAGGAUAUAUAAGUAAAAUUC - 96 |
Stem-loop(if miRNA) |
--         -         -     A    AAUAC   -AU    UCUCA   AUUUUAUUU UGUAUUUUU UAACU GUAA     UAU   UAAC     U   ||||||||| ||||||||| ||||| ||||     |||   ||||   UAAAAUGAA AUAUAGGAG AUUGA UAUU     AUA   AUUG     A CU         U         U     A    -----   CAU    UACUU |
Stem-loop sequence | AUUUUAUUUUGUAUUUUUUAACUAGUAAAAUACUAUAUUAACUCUCAUAUUCAUGUUAUACAUAUUAUAAGUUAUGAGGAUAUAUAAGUAAAAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK244306.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-02-K10 | NA | coding protein | psRNATarget | |||||||||
XM_006577222.2 |
|
3.0 | PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 14-like (LOC100797588), mRNA | mediator of RNA polymerase II transcription subunit 14-like(LOC100797588) | coding protein | psRNATarget |