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BaseInfo

ncRNA ID novel_gma_miR7875
Species Glycine max
Class miRNA
Genome position Chr18:11480119-11480167 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 26 - AGUUAGAAAUCAUCUUAGAAUGUC - 49
Stem-loop(if miRNA) --   UA           -      
  AGU  GAAAUCAUCUU AGAAUGU
  |||  ||||||||||| ||||||C
  UCA  UUUUAGUAGAA UUUUACA
AG   -C           A      
Stem-loop sequence AGUUAGAAAUCAUCUUAGAAUGUCACAUUUUAAAGAUGAUUUUCACUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763138.1
ncRNA:24   CUGUAAGAUUCUACUAAAGAUUGA   1
  **=*||||||||||||||=|||||
targets:1569   ACUCUUCUAAGAUGAUUUUUAACU   1592

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   CUGUAAGAUUCUACUAAAGAUUGA   1
  **=*||||||||||||||=|||||
targets:2278   ACUCUUCUAAGAUGAUUUUUAACU   2301

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget