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BaseInfo

ncRNA ID novel_gma_miR7874
Species Glycine max
Class miRNA
Genome position Chr10:4819076-4819139 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 23
Mature sequence(if miRNA) 42 - GAUUGAUGAUCCGUAUGAGUCAU - 64
Stem-loop(if miRNA) -GAUUGA            G  A    AAUU
       UGAUCCGUAUGA UC UACG    G
       |||||||||||| || ||||    U
       ACUAGGCAUACU AG AUGC    U
GUCAAAA            A  A    CUAA
Stem-loop sequence GAUUGAUGAUCCGUAUGAGUCAUACGAAUUGUUAAUCCGUAAGAAUCAUACGGAUCAAAAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772823.1
ncRNA:23   UACUGAGUAUGCCUAGUAGUUAG   1
  |**|||||||||||||=||||||
targets:1101   AAAACUCAUACGGAUCGUCAAUC   1123

1.5 PREDICTED: Glycine max probable S-adenosylmethionine carrier 2, chloroplastic (LOC100803828), mRNA probable S-adenosylmethionine carrier 2, chloroplastic(LOC100803828) coding protein psRNATarget
XM_014772823.1
ncRNA:23   UACUGAGUAUGCCUAGUAGUUAG   1
  =||||||||=|||||||*|||||
targets:1052   GUGACUCAUGCGGAUCAGCAAUC   1074

2.5 PREDICTED: Glycine max probable S-adenosylmethionine carrier 2, chloroplastic (LOC100803828), mRNA probable S-adenosylmethionine carrier 2, chloroplastic(LOC100803828) coding protein psRNATarget
XM_006579110.1
ncRNA:23   UACUGAGUAUGCCUAGUAGUUAG   1
  *||==||||||||||||*|||||
targets:235   CUGGUUCAUACGGAUCAACAAUC   257

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102670006), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102670006) coding protein psRNATarget