ncRNA ID | novel_gma_miR7872 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:36276169-36276377 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUAGAAUGAACAUCUGUAGGGAUC - 24 |
Stem-loop(if miRNA) |
--  G     C             A  A    AC                           A    U          UC A      C   G          GG   UC UUACA AUGUUCAUUCUAA CC AAUU  GAUAAACUCAUCUCUUACCUCUAAGCG GCUC CGUGUGUAGU  G UAGUGA AGC GCGUCUCUAG  A   || ||||| ||||||||||||| || ||||  ||||||||||||||||||||||||||| |||| ||||||||||  | |||||| ||| ||||||||||  A   AG GAUGU UACAAGUAAGAUU GG UUAA  CUAUUUGAGUAGGGAAUGGAGAUUCGC CGAG GUACACAUCA  C GUUACU UCG CGCAGAGAUC  C CU  G     C             G  G    CA                           C    U          GA C      A   A          GU |
Stem-loop sequence | UCGUUACACAUGUUCAUUCUAAACCAAAUUACGAUAAACUCAUCUCUUACCUCUAAGCGAGCUCUCGUGUGUAGUUCGAUAGUGACAGCGGCGUCUCUAGGGAACUGCUAGAGACGCAGCUAUCAUUGCCAGACUACACAUGUGAGCCCGCUUAGAGGUAAGGGAUGAGUUUAUCACAAUUGGGGUUAGAAUGAACAUCUGUAGGGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774655.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100798161 (LOC100798161), transcript variant X3, mRNA | uncharacterized LOC100798161(LOC100798161) | coding protein | psRNATarget |