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BaseInfo

ncRNA ID	novel_gma_miR7870
Species	Glycine max
Class	miRNA
Genome position	Chr18:36796047-36796212 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	24
Mature sequence(if miRNA)	143 - AACCGAUGUAGAAUUCAUGACAUU - 166
Stem-loop(if miRNA)	AAC           -U     C        U     --AAUUA    ACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUG    CGAUGUAGAAU  CAUGA AUUCUACA CGGUU       GACA                                     C    |||||||||||  ||||| |||||||| |||||       ||||    GCUACAUCUUA  GUACU UAAGAUGU GCCAG       ACCU                                     C UUU           CU     -        U     CGAACCA    GACUACAUCUAACCGAAGAUAAGAUGAUGCCAGGGAA
Stem-loop sequence	AACCGAUGUAGAAUUCAUGACAUUCUACAUCGGUUAAUUAGACAACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUGCCAAGGGACCGUAGUAGAAUAGAAGCCAAUCUACAUCAGUCCAACCAAGCGACCGUUGUAGAAUUCAUGUCAUUCUACAUCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003539359.3	ncRNA:24   UUACAGUACUUAAGAUGUAGCCAA   1   ||*||||||*|||||||||||||| targets:2798   AAAGUCAUGCAUUCUACAUCGGUU   2821 Target Full Sequence	1.0	PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA	MLO-like protein 6(LOC100776714)	coding protein	psRNATarget
XM_006598094.2	ncRNA:24   UUACAGUA-CUUAAGAUGUAGCCAA   1   ||---|||-|*|||||||||||||| targets:843   AA---CAUUGCAUUCUACAUCGGUU   864 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UUACAGUA-CUUAAGAUGUAGCCAA   1   ||---|||-|*|||||||||||||| targets:956   AA---CAUUGCAUUCUACAUCGGUU   977 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UUACAGUA-CUUAAGAUGUAGCCAA   1   ||---|||-|*|||||||||||||| targets:1116   AA---CAUUGCAUUCUACAUCGGUU   1137 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UUACAGUA-CUUAAGAUGUAGCCAA   1   ||---|||-|*|||||||||||||| targets:1393   AA---CAUUGCAUUCUACAUCGGUU   1414 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UUACAGUA-CUUAAGAUGUAGCCAA   1   ||---|||-|*|||||||||||||| targets:1556   AA---CAUUGCAUUCUACAUCGGUU   1577 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget