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BaseInfo

ncRNA ID novel_gma_miR7869
Species Glycine max
Class miRNA
Genome position Chr1:12651730-12651790 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - UUUCUGGUACUCUCUAGAACU - 21
Stem-loop(if miRNA) --      GU      U    CUC       UG
  UUUCUG  ACUCUC AGAA   UUCUGAU  C
  ||||||  |||||| ||||   |||||||
  AGAGAC  UGAGAG UCUU   AGGAUUA  U
AA      --      U    ---       UC
Stem-loop sequence UUUCUGGUACUCUCUAGAACUCUUCUGAUUGCUCUAUUAGGAUUCUUGAGAGUCAGAGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003517841.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  *|||=|=|||||||||||||*
targets:1014   CGUUUUGGAGAGUACCAGAAC   1034

3.0 PREDICTED: Glycine max pectinesterase PPME1-like (LOC100786427), mRNA pectinesterase PPME1-like(LOC100786427) coding protein psRNATarget
XM_006574720.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:406   GCAUUUAUAGAGUACCAGAAA   426

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X6, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget
XM_006574716.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:406   GCAUUUAUAGAGUACCAGAAA   426

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X1, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget
XM_006574717.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:406   GCAUUUAUAGAGUACCAGAAA   426

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X3, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget
XM_006574719.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:406   GCAUUUAUAGAGUACCAGAAA   426

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X5, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget
XM_014765664.1
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:407   GCAUUUAUAGAGUACCAGAAA   427

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X4, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget
XM_006574718.2
ncRNA:21   UCAAGAUCUCUCAUGGUCUUU   1
  =**|=||*|||||||||||||
targets:683   GCAUUUAUAGAGUACCAGAAA   703

3.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC102669855), transcript variant X2, mRNA UPF0481 protein At3g47200-like(LOC102669855) coding protein psRNATarget