Search result

BaseInfo

ncRNA ID	novel_gma_miR7864
Species	Glycine max
Class	miRNA
Genome position	Chr18:50162329-50162402 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615;SRR1451621
Length	24
Mature sequence(if miRNA)	1 - ACUCGCUAAGCGGACUGAGUGUCU - 24
Stem-loop(if miRNA)	--A           -    GA   UCU         -  U    CUCGCUAAGCG GACU  GUG   CGCUUAGCG GA G    ||||||||||| ||||  |||   ||||||||| ||    GAGCGAUUCGC CUGA  CAC   GCGAAUCGC CU A ACA           U    -A   ---         U  U
Stem-loop sequence	ACUCGCUAAGCGGACUGAGUGUCUCGCUUAGCGGAUGAUUCUCGCUAAGCGCACAAGUCUCGCUUAGCGAGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773240.1	ncRNA:24   UCUGUGAGUCAGGCGAAUCGCUCA   1   ||=|||||||*=|||||||||||| targets:3204   AGGCACUCAGCUCGCUUAGCGAGU   3227 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102668221 (LOC102668221), transcript variant X3, mRNA	uncharacterized LOC102668221(LOC102668221)	coding protein	psRNATarget
XM_014773238.1	ncRNA:24   UCUGUGAGUCAGGCGAAUCGCUCA   1   ||=|||||||*=|||||||||||| targets:3216   AGGCACUCAGCUCGCUUAGCGAGU   3239 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102668221 (LOC102668221), transcript variant X1, mRNA	uncharacterized LOC102668221(LOC102668221)	coding protein	psRNATarget
XM_014773239.1	ncRNA:24   UCUGUGAGUCAGGCGAAUCGCUCA   1   ||=|||||||*=|||||||||||| targets:3231   AGGCACUCAGCUCGCUUAGCGAGU   3254 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102668221 (LOC102668221), transcript variant X2, mRNA	uncharacterized LOC102668221(LOC102668221)	coding protein	psRNATarget