ncRNA ID | novel_gma_miR7847 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:36361103-36361205 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AAUGGUGAGGAUGAAGAGUA - 20 |
Stem-loop(if miRNA) |
--    C               U   C           ----C   -    AUU   UUCU CAUCCUUACCAUUCA UUU UUGAAAUCUAA     GUA UAAG   A   |||| ||||||||||||||| ||| |||||||||||     ||| ||||   GAGA GUAGGAGUGGUAAGU AAA AAUUUUAGAUU     CAU AUUC   G AU    A               U   A           ACCAA   U    AGU |
Stem-loop sequence | UUCUCCAUCCUUACCAUUCAUUUUCUUGAAAUCUAACGUAUAAGAUUAGUGACUUAUUACAACCAUUAGAUUUUAAAAAAUUGAAUGGUGAGGAUGAAGAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006575371.2 |
|
2.5 | PREDICTED: Glycine max protein LURP-one-related 7-like (LOC100806967), mRNA | protein LURP-one-related 7-like(LOC100806967) | coding protein | psRNATarget | |||||||||
BT095167.1 |
|
2.5 | Soybean clone JCVI-FLGm-6J20 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT098990.1 |
|
2.5 | Soybean clone JCVI-FLGm-23D9 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_006595767.2 |
|
3.0 | PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 12-like (LOC100797861), mRNA | glucan endo-1,3-beta-glucosidase 12-like(LOC100797861) | coding protein | psRNATarget |