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BaseInfo

ncRNA ID novel_gma_miR7840
Species Glycine max
Class miRNA
Genome position Chr1:4280958-4281048 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 68 - AUAUGUUUGGAUAGAGAAUUUUAA - 91
Stem-loop(if miRNA) --AU     UG     A        -    A    --AAU     AU
    AUGUU  GAUAG GAAUUUUA AUUG GAAA     AAUUU  C
    |||||  ||||| |||||||| |||| ||||     |||||
    UGUAG  UUAUU CUUAAAAU UAAU UUUU     UUAAG  A
CUUU     GU     A        C    A    AAAAU     AA
Stem-loop sequence AUAUGUUUGGAUAGAGAAUUUUAAUUGAGAAAAAUAAUUUAUCAAAGAAUUUAAAAUUUUAUAAUCUAAAAUUCAUUAUUUGGAUGUUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554316.3
ncRNA:24   AAUUUUAAGAGAUAGGUUUGUAUA   1
  ***=||||*|||=|||||||||||
targets:788   CGUGAAUUAUCUGUCCAAACAUAU   811

2.5 PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 57-like (LOC100800969), mRNA DEAD-box ATP-dependent RNA helicase 57-like(LOC100800969) coding protein psRNATarget