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BaseInfo

ncRNA ID	novel_gma_miR7824
Species	Glycine max
Class	miRNA
Genome position	Chr3:71179-71379 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451614
Length	21
Mature sequence(if miRNA)	181 - AUCAAGUUGAUCUGUAAGCCU - 201
Stem-loop(if miRNA)	--     G                                 C        ---      UUA       A      G             A A    A    A   AUCAA UUGAUCUGUAAGCCUUUUACAGAUCAAGUUGAU UGUAUGUU   GAUAUU   AGCAUAC GAUCAA UUGAUCCAUAAAA G UUAU GAUC A   ||||| ||||||||||||||||||||||||||||||||| ||||||||   ||||||   ||||||| |||||| ||||||||||||| | |||| |||| G   UAGUU AACUAGGCAUUCGGAAAAUGUCUAGUUCAACUA GCAUACGA   UUAUAG   UUGUAUG CUAGUU AACUAGGUAUUUU C AAUA CUAG U CC     G                                 A        AUU      ---       C      G             C G    C    U
Stem-loop sequence	AUCAAGUUGAUCUGUAAGCCUUUUACAGAUCAAGUUGAUCUGUAUGUUGAUAUUUUAAGCAUACAGAUCAAGUUGAUCCAUAAAAAGAUUAUAGAUCAAGUUGAUCCAUAAGCCUUUUAUGGAUCAAGUUGAUCCGUAUGUUGAUAUUUUAAGCAUACGAAUCAACUUGAUCUGUAAAAGGCUUACGGAUCAAGUUGAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600975.2	ncRNA:21   UCCGAAUGUCUAGUUGAACUA   1   ||*|||||=|||||||||||| targets:1247   AGCCUUACGGAUCAACUUGAU   1267 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_006600975.2	ncRNA:21   UCCGAAUGUCUAGUUGAACUA   1   |*||*|||||||=|||||||| targets:1219   AAGCAUACAGAUUAACUUGAU   1239 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_003547498.3	ncRNA:21   UCCGAAUGUCUAGUUGAACUA   1   |*||*|||=|||||||||||| targets:409   AAGCAUACGGAUCAACUUGAU   429 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:21   UCCGAAUGUCUAGUUGAACUA   1   |*||*|||=|||||||||||| targets:1004   AAGCAUACGGAUCAACUUGAU   1024 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006596363.2	ncRNA:21   UCCGAAUGUCUAGUUGAACUA   1   =*|||||=|||||||||||*| targets:1538   GAGCUUAUAGAUCAACUUGUU   1558 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized serine-rich protein C215.13-like (LOC102660974), mRNA	uncharacterized serine-rich protein C215.13-like(LOC102660974)	coding protein	psRNATarget