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BaseInfo

ncRNA ID novel_gma_miR7818
Species Glycine max
Class miRNA
Genome position Chr18:43372807-43372932 [+]
Reference genome Glycine_max_v2.0
Source SRR1451614
Length 21
Mature sequence(if miRNA) 1 - UCAGACCAGGCUUUGAAAGGC - 21
Stem-loop(if miRNA) --      C       --     GC U  G  U    UACU     --       GACCUGAAUCU   C
  UCAGAC AGGCUUU  GAAAG  C GA CC AGCC    AUGAA  UUUUUGA           GGC U
  |||||| |||||||  |||||  | || || ||||    |||||  |||||||           ||| A
  AGUCUG UCCGAAA  UUUUC  G CU GG UCGG    UAUUU  AGAAACU           CCG U
CC      A       AU     UA U  -  C    -UUU     UC       ---------AU   A
Stem-loop sequence UCAGACCAGGCUUUGAAAGGCCUGAGCCUAGCCUACUAUGAAUUUUUGAGACCUGAAUCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUUGGCUCGGUCUGAUCUUUUUAAAAGCCUAGUCUGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529736.3
ncRNA:21   CGGAAAGUUUCGGACCAGACU   1
  *=|||*||=||||||||||||
targets:2023   UUCUUACAGAGCCUGGUCUGA   2043

2.5 PREDICTED: Glycine max plasma membrane ATPase 4-like (LOC100818997), mRNA plasma membrane ATPase 4-like(LOC100818997) coding protein psRNATarget