ncRNA ID | novel_gma_miR7818 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:43372807-43372932 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451614 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCAGACCAGGCUUUGAAAGGC - 21 |
Stem-loop(if miRNA) |
--      C       --     GC U  G  U    UACU     --       GACCUGAAUCU   C   UCAGAC AGGCUUU  GAAAG  C GA CC AGCC    AUGAA  UUUUUGA           GGC U   |||||| |||||||  |||||  | || || ||||    |||||  |||||||           ||| A   AGUCUG UCCGAAA  UUUUC  G CU GG UCGG    UAUUU  AGAAACU           CCG U CC      A       AU     UA U  -  C    -UUU     UC       ---------AU   A |
Stem-loop sequence | UCAGACCAGGCUUUGAAAGGCCUGAGCCUAGCCUACUAUGAAUUUUUGAGACCUGAAUCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUUGGCUCGGUCUGAUCUUUUUAAAAGCCUAGUCUGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003529736.3 |
|
2.5 | PREDICTED: Glycine max plasma membrane ATPase 4-like (LOC100818997), mRNA | plasma membrane ATPase 4-like(LOC100818997) | coding protein | psRNATarget |