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BaseInfo

ncRNA ID novel_gma_miR7809
Species Glycine max
Class miRNA
Genome position Chr12:37494908-37495010 [+]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 21
Mature sequence(if miRNA) 1 - UUGGAUACAAGGUUAGAAGCU - 21
Stem-loop(if miRNA) --   G       ----------GUU   -------     UUUCAAGAGCUUCUCUACU
  UUG AUACAAG             AGA       AGCUC                   G
  ||| |||||||             |||       |||||
  AAC UAUGUUC             ACU       AGAUA                   A
CA   A       AAUGUUCACGAAA   CUAGAAA     ACCUUUAUAUCUCAAAAAA
Stem-loop sequence UUGGAUACAAGGUUAGAAGCUCUUUCAAGAGCUUCUCUACUGAAAAAAACUCUAUAUUUCCAAUAGAAAAGAUCUCAAAAGCACUUGUAACUUGUAUACAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519980.3
ncRNA:21   UCGAAGAUUGGAACAUAGGUU   1
  **||||||||=||||||||||
targets:1600   CCCUUCUAACUUUGUAUCCAA   1620

1.5 PREDICTED: Glycine max phosphoserine aminotransferase 2, chloroplastic-like (LOC100795286), mRNA phosphoserine aminotransferase 2, chloroplastic-like(LOC100795286) coding protein psRNATarget