Search result

BaseInfo

ncRNA ID novel_gma_miR7793
Species Glycine max
Class miRNA
Genome position Chr2:27887070-27887265 [-]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 22
Mature sequence(if miRNA) 1 - CUUCCGCAGUUGUAAUGUCAAC - 22
Stem-loop(if miRNA) --                                   -   G        U                              GUUUC    A U    AC
  UGAUAUUACAACUGUGGAAGAAUACUUCUUCCGUG AGU CUCACGGA GAUGUCUUCCGCAAGACUCCACGGAAGAAG     UUCC C GUUG  A
  ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||     |||| | ||||
  ACUGUAAUGUUGACGCCUUCUUAUGAAGAAGGCAC UCA GAGUGCCU UUACAGAAGGCGUUCUGAGGUGCCUUCUUC     AAGG G CAAC  U
CA                                   C   -        U                              GUCAU    C U    AU
Stem-loop sequence UGAUAUUACAACUGUGGAAGAAUACUUCUUCCGUGAGUGCUCACGGAUGAUGUCUUCCGCAAGACUCCACGGAAGAAGGUUUCUUCCACUGUUGACAUUACAACUGCGGAAUACUGCUUCUUCCGUGGAGUCUUGCGGAAGACAUUUUCCGUGAGACUCCACGGAAGAAGUAUUCUUCCGCAGUUGUAAUGUCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527348.3
ncRNA:22   CAACUGUAAUGUUGACGCCUUC   1
  ***|||||||||||||||||||
targets:2241   AAAGACAUUACAACUGCGGAAG   2262

0.0 PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA uncharacterized LOC100788685(LOC100788685) coding protein psRNATarget
XM_003527348.3
ncRNA:22   CAACUGUAAUGUUGACGCCUUC   1
  *||||=|||||||||||||||*
targets:2429   AUUGAUAUUACAACUGCGGAAA   2450

2.0 PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA uncharacterized LOC100788685(LOC100788685) coding protein psRNATarget