ncRNA ID | novel_gma_miR7792 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:35584715-35584843 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451613 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUGUCAGGAACUAAGAAAAUCC - 24 |
Stem-loop(if miRNA) |
--AA           AG  A     ----------------             A   UUUU                UUUUUUAGUUU  GA GUUUA                AAGAUCCCUGUCG UAA    UUUUUUAACUCA     |||||||||||  || |||||                ||||||||||||| |||    |||||||||||C     AAAGAAUCAAG  CU UAAAU                UUCUAGGGACGGC AUU    AAAAAAUUGAGG CCUA           GA  G     GUAAAAUUAAGAGUUU             A   --UU            |
Stem-loop sequence | AAUUUUUUAGUUUAGGAAGUUUAAAGAUCCCUGUCGAUAAUUUUUUUUUUAACUCACGGAGUUAAAAAAUUUUAACGGCAGGGAUCUUUUUGAGAAUUAAAAUGUAAAUGUCAGGAACUAAGAAAAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003529447.3 |
|
2.5 | PREDICTED: Glycine max mitochondrial inner membrane protein OXA1-like (LOC100787806), transcript variant X1, mRNA | mitochondrial inner membrane protein OXA1-like(LOC100787806) | coding protein | psRNATarget |