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BaseInfo

ncRNA ID novel_gma_miR7792
Species Glycine max
Class miRNA
Genome position Chr2:35584715-35584843 [-]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 24
Mature sequence(if miRNA) 1 - AAAUGUCAGGAACUAAGAAAAUCC - 24
Stem-loop(if miRNA) --AA           AG  A     ----------------             A   UUUU           
    UUUUUUAGUUU  GA GUUUA                AAGAUCCCUGUCG UAA    UUUUUUAACUCA
    |||||||||||  || |||||                ||||||||||||| |||    |||||||||||C
    AAAGAAUCAAG  CU UAAAU                UUCUAGGGACGGC AUU    AAAAAAUUGAGG
CCUA           GA  G     GUAAAAUUAAGAGUUU             A   --UU           
Stem-loop sequence AAUUUUUUAGUUUAGGAAGUUUAAAGAUCCCUGUCGAUAAUUUUUUUUUUAACUCACGGAGUUAAAAAAUUUUAACGGCAGGGAUCUUUUUGAGAAUUAAAAUGUAAAUGUCAGGAACUAAGAAAAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529447.3
ncRNA:24   CCUA-AAAGAAUCAAGGACUGUAAA   1
  |||*-||||||=||||||||*||||
targets:123   GGACAUUUCUUGGUUCCUGAAAUUU   147

2.5 PREDICTED: Glycine max mitochondrial inner membrane protein OXA1-like (LOC100787806), transcript variant X1, mRNA mitochondrial inner membrane protein OXA1-like(LOC100787806) coding protein psRNATarget