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BaseInfo

ncRNA ID novel_gma_miR7785
Species Glycine max
Class miRNA
Genome position Chr18:9643749-9643829 [+]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 24
Mature sequence(if miRNA) 1 - UAAGGUUGAGCUUUGUGAUGGACA - 24
Stem-loop(if miRNA) --U   GU       U    U  ACAAACCUUUAUAAAUA
   AAG  UGAGCUU GUGA GG                 A
   |||  ||||||| |||| ||                 A
   UUC  AUUCGAA CACU GU                 A
CUC   UC       C    A  UUUAAUUCUCGUAGGCU
Stem-loop sequence UAAGGUUGAGCUUUGUGAUGGACAAACCUUUAUAAAUAAAAUCGGAUGCUCUUAAUUUUGAUCACCAAGCUUACUCUUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585053.2
ncRNA:24   AC--AG-GUAGUGUUUCGAGUUGGAAU   1
  ||--||-||||*|||||*|||||||||
targets:85   UGCUUCUCAUCUCAAAGAUCAACCUUA   111

2.5 PREDICTED: Glycine max flavonoid 3',5'-methyltransferase-like (LOC100813350), transcript variant X1, mRNA flavonoid 3',5'-methyltransferase-like(LOC100813350) coding protein psRNATarget
XM_006585054.2
ncRNA:24   AC--AG-GUAGUGUUUCGAGUUGGAAU   1
  ||--||-||||*|||||*|||||||||
targets:88   UGCUUCUCAUCUCAAAGAUCAACCUUA   114

2.5 PREDICTED: Glycine max flavonoid 3',5'-methyltransferase-like (LOC100813350), transcript variant X2, mRNA flavonoid 3',5'-methyltransferase-like(LOC100813350) coding protein psRNATarget