ncRNA ID | gba-miR7500a |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GAAUAACUCGAUUCGUUUAACU - NA |
Stem-loop(if miRNA) |
G        GAA   A    U             -G     AUU   AAAAU   U UGUUAGUACAUUGGUUAGGACAUUAUGAUUAAAUUAUGAUAUAUAUGUUACAUUAUUAUAUGAUUAUUCGUAUUUAUUCUGAAAUAUCCGGUAAUACUCUGCAACCUUAUUCUGGUGACGGAAAAGGAUUAUGAGGUGUUACAGAGGGA  UUGGGUUU   UGA GUUA AUGAAUUGAGUUA  CAAGU   UGU     ACC G                                                                                                                                                     G  ||||||||   ||| |||| |||||||||||||  |||||   |||     ||| |                                                                                                                                                     U  AACUUAAA   ACU CAAU UGCUUAGCUCAAU  GUUCA   UUG     AGU U                                                                                                                                                     A -        ---   -    U             AA     --G   -----   - AAAAAAAACUUAAAGCUCAAACUUAGCUCAAAUUAAAGCUUAAACUUAUUAAGUUUAUUGAGCUUAUUUGGCUUAUGGUUUGAUAUUAUAAAAUGUAAAAAUGGGGUUUGGAGGUUUGAAAAAUGAAAGAAUGAAAGGGGGUUAUGAAA |
Stem-loop sequence | GUUGGGUUUGAAUGAAGUUAUAUGAAUUGAGUUAGCAAGUAUUUGUAAAAUACCUGUGUUAGUACAUUGGUUAGGACAUUAUGAUUAAAUUAUGAUAUAUAUGUUACAUUAUUAUAUGAUUAUUCGUAUUUAUUCUGAAAUAUCCGGUAAUACUCUGCAACCUUAUUCUGGUGACGGAAAAGGAUUAUGAGGUGUUACAGAGGGAGUAAAAGUAUUGGGGGAAAGUAAGAAAGUAAAAAGUUUGGAGGUUUGGGGUAAAAAUGUAAAAUAUUAUAGUUUGGUAUUCGGUUUAUUCGAGUUAUUUGAAUUAUUCAAAUUCGAAAUUAAACUCGAUUCAAACUCGAAAUUCAAAAAAAAUUGAGUUGACUUGAAUAACUCGAUUCGUUUAACUCAAAAUUCAA |