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BaseInfo

ncRNA ID novel_gma_miR7784
Species Glycine max
Class miRNA
Genome position Chr18:48636064-48636148 [-]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 21
Mature sequence(if miRNA) 65 - UUUCAUACGGAUCAAGUUGAU - 85
Stem-loop(if miRNA) --    A                     ----   U  U   AA
  UUUC UACGGAUCAAGUUGAUUCGUA    ACU CC GAU  A
  |||| |||||||||||||||||||||    ||| || |||  G
  GGAG AUGCCUAGUUUAACUAGGCGU    UGA GG CUA  U
AA    A                     UCUC   C  C   GU
Stem-loop sequence UUUCAUACGGAUCAAGUUGAUUCGUAACUUCCUGAUAAAGUUGAUCCGGCAGUCUCUUGCGGAUCAAUUUGAUCCGUAAGAGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774682.1
ncRNA:21   UAGUUGAACUAGGCAUACUUU   1
  **|||*|||||=|||||||||
targets:824   UCCAAGUUGAUUCGUAUGAAA   844

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X2, mRNA nuclear pore complex protein NUP1-like(LOC100789007) coding protein psRNATarget
XM_014774683.1
ncRNA:21   UAGUUGAACUAGGCAUACUUU   1
  **|||*|||||=|||||||||
targets:883   UCCAAGUUGAUUCGUAUGAAA   903

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X3, mRNA nuclear pore complex protein NUP1-like(LOC100789007) coding protein psRNATarget
XM_006578386.2
ncRNA:21   UAGUUGAACUAGGCAUACUUU   1
  **|||*|||||=|||||||||
targets:1264   UCCAAGUUGAUUCGUAUGAAA   1284

2.5 PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X1, mRNA nuclear pore complex protein NUP1-like(LOC100789007) coding protein psRNATarget