ncRNA ID | novel_gma_miR7784 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:48636064-48636148 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451613 |
Length | 21 |
Mature sequence(if miRNA) | 65 - UUUCAUACGGAUCAAGUUGAU - 85 |
Stem-loop(if miRNA) |
--    A                     ----   U  U   AA   UUUC UACGGAUCAAGUUGAUUCGUA    ACU CC GAU  A   |||| |||||||||||||||||||||    ||| || |||  G   GGAG AUGCCUAGUUUAACUAGGCGU    UGA GG CUA  U AA    A                     UCUC   C  C   GU |
Stem-loop sequence | UUUCAUACGGAUCAAGUUGAUUCGUAACUUCCUGAUAAAGUUGAUCCGGCAGUCUCUUGCGGAUCAAUUUGAUCCGUAAGAGGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774682.1 |
|
2.5 | PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X2, mRNA | nuclear pore complex protein NUP1-like(LOC100789007) | coding protein | psRNATarget | |||||||||
XM_014774683.1 |
|
2.5 | PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X3, mRNA | nuclear pore complex protein NUP1-like(LOC100789007) | coding protein | psRNATarget | |||||||||
XM_006578386.2 |
|
2.5 | PREDICTED: Glycine max nuclear pore complex protein NUP1-like (LOC100789007), transcript variant X1, mRNA | nuclear pore complex protein NUP1-like(LOC100789007) | coding protein | psRNATarget |