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BaseInfo

ncRNA ID novel_gma_miR7780
Species Glycine max
Class miRNA
Genome position Chr10:40057320-40057375 [-]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 20
Mature sequence(if miRNA) 1 - UAAACUCAUACGGAAGAACU - 20
Stem-loop(if miRNA) --             CUCA   A    A
  UUCUUCCGUAUGA    UAC GGAG A
  |||||||||||||    ||| |||| C
  AAGAAGGCAUACU    AUG CUUC U
UC             -CAA   C    U
Stem-loop sequence UUCUUCCGUAUGACUCAUACAGGAGAACUUCUUCCGUAAACUCAUACGGAAGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604096.2
ncRNA:20   UCAAGAAGGCAUACUCAAAU   1
  ||||*|||||||||||||||
targets:623   AGUUGUUCCGUAUGAGUUUA   642

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666607), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666607) coding protein psRNATarget
XM_003544577.3
ncRNA:20   UCAAGAAGGCAUACUCAAAU   1
  |*|||||||*||||||||||
targets:585   AAUUCUUCCUUAUGAGUUUA   604

2.5 PREDICTED: Glycine max serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like (LOC100781390), mRNA serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like(LOC100781390) coding protein psRNATarget