ncRNA ID | novel_gma_miR7779 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:38026400-38026504 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451613 |
Length | 22 |
Mature sequence(if miRNA) | 84 - UUUGGAUACAAGGUUAGAAGCU - 105 |
Stem-loop(if miRNA) |
--    G       ----------GUU   -------     UUUCAAGAGCUUCUCUACU   UUUG AUACAAG             AGA       AGCUC                   G   |||| |||||||             |||       |||||   AAAC UAUGUUC             ACU       AGAUA                   A AC    A       AAUGUUCACGAAA   CUAGAAA     AUCUUUAUAUCUCAAAAAA |
Stem-loop sequence | UUUGGAUACAAGGUUAGAAGCUCUUUCAAGAGCUUCUCUACUGAAAAAAACUCUAUAUUUCUAAUAGAAAAGAUCUCAAAAGCACUUGUAACUUGUAUACAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006578927.2 |
|
1.0 | PREDICTED: Glycine max auxin response factor 17-like (LOC102662128), mRNA | auxin response factor 17-like(LOC102662128) | coding protein | psRNATarget | |||||||||
XM_003519980.3 |
|
1.5 | PREDICTED: Glycine max phosphoserine aminotransferase 2, chloroplastic-like (LOC100795286), mRNA | phosphoserine aminotransferase 2, chloroplastic-like(LOC100795286) | coding protein | psRNATarget | |||||||||
XM_006595861.2 |
|
2.5 | PREDICTED: Glycine max omega-hydroxypalmitate O-feruloyl transferase-like (LOC100797134), mRNA | omega-hydroxypalmitate O-feruloyl transferase-like(LOC100797134) | coding protein | psRNATarget |