Search result

BaseInfo

ncRNA ID	novel_gma_miR7768
Species	Glycine max
Class	miRNA
Genome position	Chr12:1491536-1491604 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292924
Length	24
Mature sequence(if miRNA)	1 - AUCAUGUUGAUCCGUAUGAGUCAU - 24
Stem-loop(if miRNA)	--    U              G  A     C GA   AUCA GUUGAUCCGUAUGA UC UACGG U  A   |||| |||||||||||||| || ||||| |  C   UAGU CAACUAGGCAUACU AG AUGCC A  U UC    U              G  A     U AU
Stem-loop sequence	AUCAUGUUGAUCCGUAUGAGUCAUACGGCUGAACUUAAUCCGUAAGAGUCAUACGGAUCAACUUGAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:24   UACUGAGUAUGCCUAGUUGUACUA   1   *|||**|||||||||||||*|||| targets:406   UUGAAGCAUACGGAUCAACUUGAU   429 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UACUGAGUAUGCCUAGUUGUACUA   1   *|||**|||||||||||||*|||| targets:1001   UUGAAGCAUACGGAUCAACUUGAU   1024 Target Full Sequence	2.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014777356.1	ncRNA:24   UACUGAGUAUGCCUAGUUGUACUA   1   *||=||**|||||||||||||||* targets:2171   UUGGCUACUACGGAUCAACAUGAG   2194 Target Full Sequence	3.0	PREDICTED: Glycine max (+)-neomenthol dehydrogenase-like (LOC100803877), transcript variant X1, mRNA	(+)-neomenthol dehydrogenase-like(LOC100803877)	coding protein	psRNATarget