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BaseInfo

ncRNA ID novel_gma_miR7767
Species Glycine max
Class miRNA
Genome position Chr12:14502596-14502686 [-]
Reference genome Glycine_max_v2.0
Source SRR1451613
Length 21
Mature sequence(if miRNA) 1 - AUUAACAUCGAUUUCAGUAGA - 21
Stem-loop(if miRNA)     GAA   C                                 
UCUA   GAA CGAUGUUAAUGUAAUAUAUUAAUAUCGGUUUUCC
||||   ||| |||||||||||||||||||||||||||||||||A
AGAU   UUU GCUACAAUUACAUUAUAUAAUUGUAGCCAAAAGU
    GAC   A                                 
Stem-loop sequence UCUAGAAGAACCGAUGUUAAUGUAAUAUAUUAAUAUCGGUUUUCCAUGAAAACCGAUGUUAAUAUAUUACAUUAACAUCGAUUUCAGUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK244494.1
ncRNA:21   AGAUGACUUUAGCUACAAUUA   1
  |*||=|||||||*||||||||
targets:2634   UGUAUUGAAAUCUAUGUUAAU   2654

2.5 Glycine max cDNA, clone: GMFL01-05-B16 NA coding protein psRNATarget
XM_006597706.2
ncRNA:21   AGAUGACUUUAGCUACAAUUA   1
  |*||=|||||||*||||||||
targets:2733   UGUAUUGAAAUCUAUGUUAAU   2753

2.5 PREDICTED: Glycine max potassium transporter 10 (LOC100796449), transcript variant X2, mRNA potassium transporter 10(LOC100796449) coding protein psRNATarget
AK243985.1
ncRNA:21   AGAUGACUUUAGCUACAAUUA   1
  |*||=|||||||*||||||||
targets:2662   UGUAUUGAAAUCUAUGUUAAU   2682

2.5 Glycine max cDNA, clone: GMFL01-01-M15 NA coding protein psRNATarget
XM_003546350.3
ncRNA:21   AGAUGACUUUAGCUACAAUUA   1
  |*||=|||||||*||||||||
targets:2738   UGUAUUGAAAUCUAUGUUAAU   2758

2.5 PREDICTED: Glycine max potassium transporter 10 (LOC100796449), transcript variant X1, mRNA potassium transporter 10(LOC100796449) coding protein psRNATarget