Search result

BaseInfo

ncRNA ID novel_gma_miR7763
Species Glycine max
Class miRNA
Genome position Chr20:8874543-8874668 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612;SRR1451615;SRR1451621
Length 24
Mature sequence(if miRNA) 103 - UCCCAAAUAACCGUCUUAGAAUGU - 126
Stem-loop(if miRNA) --                 AACA                UG   UAA     ---AAUU    A
  AUUCUAAGGCGGUUAUU    ACCGUCUUAGAAUGUG  UUG   AAAGA       UUAG U
  |||||||||||||||||    ||||||||||||||||  |||   |||||       |||| A
  UAAGAUUCUGCCAAUAA    UGGCAGAAUCUUACAC  AGC   UUUUU       AAUC U
UG                 ACCC                UG   CAC     GAACAUU    C
Stem-loop sequence AUUCUAAGGCGGUUAUUAACAACCGUCUUAGAAUGUGUGUUGUAAAAAGAAAUUUUAGAUAUCCUAAUUACAAGUUUUUCACCGAGUCACAUUCUAAGACGGUCCCAAAUAACCGUCUUAGAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773514.1
ncRNA:24   UGUAAGAUUCUGCCAAUAAACCCU   1
  ||||||||||||||||||||||||
targets:268   ACAUUCUAAGACGGUUAUUUGGGA   291

0.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget