ncRNA ID | novel_gma_miR7748 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:12379917-12380008 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCUAAGACGAUUAUUACAUC - 21 |
Stem-loop(if miRNA) |
--          A           A  CC      A     UU UU   UUCUAAGACG UUAUUACAUCA AA  GUCUUA AAAGU  G  A   |||||||||| ||||||||||| ||  |||||| |||||  |   AAGAUUCUGC AAUAAUGUAGU UU  UAGGAU UUUCG  C  G AA          C           C  AA      C     UC CA |
Stem-loop sequence | UUCUAAGACGAUUAUUACAUCAAAACCGUCUUAAAAAGUUUGUUAGACCCUGCUUUCUAGGAUAAUUCUGAUGUAAUAACCGUCUUAGAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583923.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X3, mRNA | uncharacterized LOC100785875(LOC100785875) | coding protein | psRNATarget | |||||||||
XM_006583925.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X2, mRNA | uncharacterized LOC100785875(LOC100785875) | coding protein | psRNATarget | |||||||||
XM_006583922.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X1, mRNA | uncharacterized LOC100785875(LOC100785875) | coding protein | psRNATarget |