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BaseInfo

ncRNA ID novel_gma_miR7748
Species Glycine max
Class miRNA
Genome position Chr18:12379917-12380008 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - UUCUAAGACGAUUAUUACAUC - 21
Stem-loop(if miRNA) --          A           A  CC      A     UU UU
  UUCUAAGACG UUAUUACAUCA AA  GUCUUA AAAGU  G  A
  |||||||||| ||||||||||| ||  |||||| |||||  |
  AAGAUUCUGC AAUAAUGUAGU UU  UAGGAU UUUCG  C  G
AA          C           C  AA      C     UC CA
Stem-loop sequence UUCUAAGACGAUUAUUACAUCAAAACCGUCUUAAAAAGUUUGUUAGACCCUGCUUUCUAGGAUAAUUCUGAUGUAAUAACCGUCUUAGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583923.2
ncRNA:21   CUACA-UUAUUAGCAGAAUCUU   1
  *||||-||*|||||||||||||
targets:1410   CAUGUUAAAAAUCGUCUUAGAA   1431

3.0 PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X3, mRNA uncharacterized LOC100785875(LOC100785875) coding protein psRNATarget
XM_006583925.2
ncRNA:21   CUACA-UUAUUAGCAGAAUCUU   1
  *||||-||*|||||||||||||
targets:1420   CAUGUUAAAAAUCGUCUUAGAA   1441

3.0 PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X2, mRNA uncharacterized LOC100785875(LOC100785875) coding protein psRNATarget
XM_006583922.2
ncRNA:21   CUACA-UUAUUAGCAGAAUCUU   1
  *||||-||*|||||||||||||
targets:1498   CAUGUUAAAAAUCGUCUUAGAA   1519

3.0 PREDICTED: Glycine max uncharacterized LOC100785875 (LOC100785875), transcript variant X1, mRNA uncharacterized LOC100785875(LOC100785875) coding protein psRNATarget