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BaseInfo

ncRNA ID novel_gma_miR7732
Species Glycine max
Class miRNA
Genome position Chr17:16217394-16217452 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612;SRR1451613;SRR1451615;SRR1451618;SRR1451620;SRR1451621
Length 21
Mature sequence(if miRNA) 1 - UUUGCGGACGAGGAAGGUGCU - 21
Stem-loop(if miRNA) --          UGGA     G    G  G
  CAUCUUUUUC    GUAGA UGAG UU G
  ||||||||||    ||||| |||| ||
  GUGGAAGGAG    CGUUU ACUC GA G
UC          CAGG     -    G  C
Stem-loop sequence CAUCUUUUUCUGGAGUAGAGUGAGGUUGGGCAGGCUCAUUUGCGGACGAGGAAGGUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003530126.3
ncRNA:21   UCGUGGAAGGAGCAGGCGUUU   1
  |*||||||||||*||||||||
targets:185   ACCACCUUCCUCCUCCGCAAA   205

1.5 PREDICTED: Glycine max GATA transcription factor 2-like (LOC100782863), transcript variant X1, mRNA GATA transcription factor 2-like(LOC100782863) coding protein psRNATarget
XM_006583487.2
ncRNA:21   UCGUGGAAGGAGCAGGCGUUU   1
  |*||||||||||*||||||||
targets:185   ACCACCUUCCUCCUCCGCAAA   205

1.5 PREDICTED: Glycine max GATA transcription factor 2-like (LOC100782863), transcript variant X2, mRNA GATA transcription factor 2-like(LOC100782863) coding protein psRNATarget
XM_003539074.3
ncRNA:21   UCGUGGAAGGAGCAGGCGUUU   1
  =||*=|||||||||||||||*
targets:412   GGCUUCUUCCUCGUCCGCAAU   432

3.0 PREDICTED: Glycine max nuclear pore complex protein NUP62-like (LOC100781711), mRNA nuclear pore complex protein NUP62-like(LOC100781711) coding protein psRNATarget