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BaseInfo

ncRNA ID novel_gma_miR7723
Species Glycine max
Class miRNA
Genome position Chr1:6361652-6361702 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 31 - CCGGAAGAAGAAUUUGUGACU - 51
Stem-loop(if miRNA) --       A  AA      ---    C
  CCGGAAG AG  UUUGUG   ACUU C
  ||||||| ||  ||||||   ||||
  GGCCUUC UC  AAACAC   UGAA A
AA       A  --      CCA    G
Stem-loop sequence CCGGAAGAAGAAUUUGUGACUUCCAGAAGUACCCACAAACUACUUCCGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573284.2
ncRNA:21   UCAGUGUUUAAGAAGAAGGCC   1
  **|||=*||||||||||||||
targets:1651   CUUCAUCAAUUCUUCUUCCGG   1671

2.0 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget
BT098485.1
ncRNA:21   UCAGUGUUUAAGAAGAAGGCC   1
  ***||||||||||||||||*|
targets:392   CUGCACAAAUUCUUCUUCCAG   412

2.5 Soybean clone JCVI-FLGm-12D21 unknown mRNA NA coding protein psRNATarget
XM_003549661.3
ncRNA:21   UCAGUGUUUAAGAAGAAGGCC   1
  |||**|*||||||||||||||
targets:687   AGUAUCUAAUUCUUCUUCCGG   707

3.0 PREDICTED: Glycine max WRKY transcription factor 6-like (LOC100784668), mRNA WRKY transcription factor 6-like(LOC100784668) coding protein psRNATarget