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BaseInfo

ncRNA ID novel_gma_miR7715
Species Glycine max
Class miRNA
Genome position Chr16:24253239-24253396 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 1 - AGAAAUUGACUUCUCUGUUGUCCU - 24
Stem-loop(if miRNA) -  AAA   A                  CU   CUA    G         ACU  GUUUGUGUUAAUAUUUAAUUUUGU
 AG   UUG CUUCUCUGUUGUCCUUUU  CAG   UCCC GUGUUGUCC   UA                        G
 ||   ||| ||||||||||||||||||  |||   |||| |||||||||   ||
 UC   GAC GAAGAGACGACGGGGAAA  GUC   AGGG CACGACGGG   AC                        A
G  CUG   C                  AG   AAC    G         -GA  UUUUAGUGUGUCAAAAUUUAACUU
Stem-loop sequence AGAAAUUGACUUCUCUGUUGUCCUUUUCUCAGCUAUCCCGGUGUUGUCCACUUAGUUUGUGUUAAUAUUUAAUUUUGUGAUUCAAUUUAAAACUGUGUGAUUUUCAAGGGGCAGCACGGGGACAACUGGAAAAGGGGCAGCAGAGAAGCCAGGUCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598182.2
ncRNA:24   UCCUGUUGUCUCUUCAGUUAAAGA   1
  |||||||=|*|||||||||||||*
targets:22   AGGACAAUAAAGAAGUCAAUUUCA   45

3.0 PREDICTED: Glycine max uncharacterized LOC102660381 (LOC102660381), mRNA uncharacterized LOC102660381(LOC102660381) coding protein psRNATarget